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LOC105370373 uncharacterized LOC105370373 [ Homo sapiens (human) ]

Gene ID: 105370373, updated on 17-Jun-2024

Summary

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Gene symbol
LOC105370373
Gene description
uncharacterized LOC105370373
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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See LOC105370373 in Genome Data Viewer
Location:
13q34
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 13 NC_000013.11 (112361613..112376278, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 13 NC_060937.1 (111608781..111623446, complement)

Chromosome 13 - NC_000013.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124903250 Neighboring gene long intergenic non-protein coding RNA 1044 Neighboring gene OCT4-NANOG-H3K4me1 hESC enhancer GRCh37_chr13:113000836-113001624 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr13:113004827-113005327 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr13:113032121-113033320 Neighboring gene uncharacterized LOC105370372 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr13:113046012-113046542 Neighboring gene sperm acrosome associated 7 Neighboring gene tubulin gamma complex component 3 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr13:113161934-113162852 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr13:113233725-113234278 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 5529 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 5530 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 5531 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr13:113242463-113243282 Neighboring gene uncharacterized LOC124903251

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

Genotypes

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000013.11 Reference GRCh38.p14 Primary Assembly

    Range
    112361613..112376278 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_944295.3 RNA Sequence

Reference GRCh38.p14 ALT_REF_LOCI_1

Genomic

  1. NT_187592.1 Reference GRCh38.p14 ALT_REF_LOCI_1

    Range
    162583..177248 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_951842.3 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060937.1 Alternate T2T-CHM13v2.0

    Range
    111608781..111623446 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007083734.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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