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LOC105370440 uncharacterized LOC105370440 [ Homo sapiens (human) ]

Gene ID: 105370440, updated on 17-Sep-2024

Summary

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Gene symbol
LOC105370440
Gene description
uncharacterized LOC105370440
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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See LOC105370440 in Genome Data Viewer
Location:
14q12
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 14 NC_000014.9 (32042606..32057380)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 14 NC_060938.1 (26240247..26254995)

Chromosome 14 - NC_000014.9Genomic Context describing neighboring genes Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr14:32413341-32414540 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr14:32419941-32420560 Neighboring gene long intergenic non-protein coding RNA 2313 Neighboring gene ZFAND2A pseudogene 2 Neighboring gene MPRA-validated peak2133 silencer Neighboring gene MED14-independent group 3 enhancer GRCh37_chr14:32489479-32490678 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 5657 Neighboring gene Sharpr-MPRA regulatory region 9862 Neighboring gene ARHGAP5 antisense RNA 1 (head to head) Neighboring gene Rho GTPase activating protein 5 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr14:32596327-32597277

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

Genotypes

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000014.9 Reference GRCh38.p14 Primary Assembly

    Range
    32042606..32057380
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_001750712.1 RNA Sequence

  2. XR_943727.2 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060938.1 Alternate T2T-CHM13v2.0

    Range
    26240247..26254995
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007084586.1 RNA Sequence

  2. XR_007084587.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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