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LOC105370686 uncharacterized LOC105370686 [ Homo sapiens (human) ]

Gene ID: 105370686, updated on 17-Jun-2024

Summary

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Gene symbol
LOC105370686
Gene description
uncharacterized LOC105370686
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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See LOC105370686 in Genome Data Viewer
Location:
14q32.32
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 14 NC_000014.9 (103294074..103317142, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 14 NC_060938.1 (97530126..97553049, complement)

Chromosome 14 - NC_000014.9Genomic Context describing neighboring genes Neighboring gene H3K4me1 hESC enhancer GRCh37_chr14:103747748-103748546 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr14:103748547-103749344 Neighboring gene RAP2C pseudogene 1 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr14:103753471-103754274 Neighboring gene ribosomal protein L17 pseudogene 4 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr14:103768183-103768683 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr14:103777212-103778188 Neighboring gene CRISPRi-validated cis-regulatory element chr14.2493 Neighboring gene uncharacterized LOC105378183 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 9099 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 9100 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 9101 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 6148 Neighboring gene EIF5 divergent transcript Neighboring gene eukaryotic translation initiation factor 5

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

Genotypes

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000014.9 Reference GRCh38.p14 Primary Assembly

    Range
    103294074..103317142 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_944246.2 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060938.1 Alternate T2T-CHM13v2.0

    Range
    97530126..97553049 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007085065.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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