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PWRN4 Prader-Willi region non-protein coding RNA 4 [ Homo sapiens (human) ]

Gene ID: 105370731, updated on 17-Sep-2024

Summary

Official Symbol
PWRN4provided by HGNC
Official Full Name
Prader-Willi region non-protein coding RNA 4provided by HGNC
Primary source
HGNC:HGNC:49130
See related
AllianceGenome:HGNC:49130
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
LINC01084
Expression
Low expression observed in reference dataset See more
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Genomic context

See PWRN4 in Genome Data Viewer
Location:
15q11.2
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 15 NC_000015.10 (23975147..24088154)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 15 NC_060939.1 (21709234..21822232)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 15 NC_000015.9 (24220294..24333301)

Chromosome 15 - NC_000015.10Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124903447 Neighboring gene ReSE screen-validated silencer GRCh37_chr15:24172104-24172318 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr15:24199761-24200274 Neighboring gene uncharacterized LOC107984787 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr15:24200275-24200786 Neighboring gene uncharacterized LOC105370733 Neighboring gene uncharacterized LOC105370732 Neighboring gene Prader-Willi region non-protein coding RNA 2 Neighboring gene uncharacterized LOC102723749

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_126392.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC087474, BI712798, CK820921

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000015.10 Reference GRCh38.p14 Primary Assembly

    Range
    23975147..24088154
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p14 PATCHES

Genomic

  1. NW_021160017.1 Reference GRCh38.p14 PATCHES

    Range
    4922979..4980836
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060939.1 Alternate T2T-CHM13v2.0

    Range
    21709234..21822232
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)