U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC105371077 uncharacterized LOC105371077 [ Homo sapiens (human) ]

Gene ID: 105371077, updated on 17-Jun-2024

Summary

Go to the top of the page Help
Gene symbol
LOC105371077
Gene description
uncharacterized LOC105371077
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC105371077 in Genome Data Viewer
Location:
16p13.2
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 16 NC_000016.10 (9790975..9810765)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 16 NC_060940.1 (9824487..9851774)

Chromosome 16 - NC_000016.10Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC132205950 Neighboring gene RNA, 5S ribosomal pseudogene 403 Neighboring gene RNA, 5S ribosomal pseudogene 404 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr16:9764099-9764878 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:9767805-9768370 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:9768371-9768936 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:9770634-9771198 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr16:9771199-9771764 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:9773923-9774850 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:9774851-9775778 Neighboring gene glutamate ionotropic receptor NMDA type subunit 2A Neighboring gene ATAC-STARR-seq lymphoblastoid active region 10376 Neighboring gene NANOG hESC enhancer GRCh37_chr16:10050616-10051155 Neighboring gene uncharacterized LOC105371076 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:10132543-10133043 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 7188 Neighboring gene Sharpr-MPRA regulatory region 8841 Neighboring gene inosine monophosphate dehydrogenase 1 pseudogene 11

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help
  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

Phenotypes

Go to the top of the page Help

Review eQTL and phenotype association data in this region using PheGenI

Variation

Go to the top of the page Help

See studies and variants in dbVar

Genotypes

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000016.10 Reference GRCh38.p14 Primary Assembly

    Range
    9790975..9810765
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_933063.4 RNA Sequence

  2. XR_933062.4 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060940.1 Alternate T2T-CHM13v2.0

    Range
    9824487..9851774
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007086864.1 RNA Sequence

  2. XR_007086865.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials