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LOC105371710 uncharacterized LOC105371710 [ Homo sapiens (human) ]

Gene ID: 105371710, updated on 22-Oct-2024

Summary

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Gene symbol
LOC105371710
Gene description
uncharacterized LOC105371710
See related
Ensembl:ENSG00000301334
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Biased expression in adrenal (RPKM 4.2), testis (RPKM 1.7) and 9 other tissues See more
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Genomic context

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See LOC105371710 in Genome Data Viewer
Location:
17q11.2
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 17 NC_000017.11 (28204774..28227840, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 17 NC_060941.1 (29146411..29169716, complement)

Chromosome 17 - NC_000017.11Genomic Context describing neighboring genes Neighboring gene nemo like kinase Neighboring gene ribosomal protein S29 pseudogene 22 Neighboring gene uncharacterized LOC105371711 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 11919 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:26553198-26553848 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:26554499-26555148 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:26555149-26555798 Neighboring gene Sharpr-MPRA regulatory region 13006 Neighboring gene uncharacterized LOC105371712 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 8334 Neighboring gene peptide YY 2 (pseudogene) Neighboring gene leucine-rich repeat-containing protein 37A3 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr17:26591629-26592828 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr17:26594224-26595423 Neighboring gene pancreatic polypeptide 2, pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000017.11 Reference GRCh38.p14 Primary Assembly

    Range
    28204774..28227840 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007065685.1 RNA Sequence

    Related
    ENST00000778044.1

  2. XR_934638.2 RNA Sequence

    Related
    ENST00000778043.1

  3. XR_007065684.1 RNA Sequence

    Related
    ENST00000778048.1

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060941.1 Alternate T2T-CHM13v2.0

    Range
    29146411..29169716 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007087342.1 RNA Sequence

  2. XR_007087341.1 RNA Sequence

  3. XR_007087340.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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