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LOC105371778 uncharacterized LOC105371778 [ Homo sapiens (human) ]

Gene ID: 105371778, updated on 17-Sep-2024

Summary

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Gene symbol
LOC105371778
Gene description
uncharacterized LOC105371778
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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See LOC105371778 in Genome Data Viewer
Location:
17q21.2
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 17 NC_000017.11 (41351497..41353798)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 17 NC_060941.1 (42207029..42209330)

Chromosome 17 - NC_000017.11Genomic Context describing neighboring genes Neighboring gene TBC1 domain family member 3 pseudogene 7 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:39485793-39486362 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:39502712-39503212 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:39503213-39503713 Neighboring gene keratin 33A Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:39520859-39521360 Neighboring gene keratin 33B Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr17:39537551-39538750 Neighboring gene keratin 34

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000017.11 Reference GRCh38.p14 Primary Assembly

    Range
    41351497..41353798
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_001753056.1 RNA Sequence

Reference GRCh38.p14 PATCHES

Genomic

  1. NW_025791801.1 Reference GRCh38.p14 PATCHES

    Range
    291401..293702
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007069544.1 RNA Sequence

Reference GRCh38.p14 ALT_REF_LOCI_1

Genomic

  1. NW_003315953.2 Reference GRCh38.p14 ALT_REF_LOCI_1

    Range
    86463..88764 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_952150.2 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060941.1 Alternate T2T-CHM13v2.0

    Range
    42207029..42209330
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007087474.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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