U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC105371954 uncharacterized LOC105371954 [ Homo sapiens (human) ]

Gene ID: 105371954, updated on 10-Oct-2023

Summary

Go to the top of the page Help
Gene symbol
LOC105371954
Gene description
uncharacterized LOC105371954
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
LINC00470
Expression
Low expression observed in reference dataset See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
18p11.32
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 18 NC_000018.10 (1363630..1392709, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 18 NC_060942.1 (1518127..1561734, complement)

Chromosome 18 - NC_000018.10Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105371953 Neighboring gene Sharpr-MPRA regulatory region 5202 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr18:1208318-1209041 Neighboring gene cytochrome c oxidase subunit 6C pseudogene 3 Neighboring gene MPRA-validated peak3040 silencer Neighboring gene long intergenic non-protein coding RNA 470 Neighboring gene RN7SK pseudogene 72 Neighboring gene ATPase family AAA domain containing 1 pseudogene Neighboring gene ReSE screen-validated silencer GRCh37_chr18:1369016-1369234 Neighboring gene uncharacterized LOC105371960 Neighboring gene Sharpr-MPRA regulatory region 5473 Neighboring gene uncharacterized LOC105371959

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help
  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

Phenotypes

Go to the top of the page Help

Review eQTL and phenotype association data in this region using PheGenI

Variation

Go to the top of the page Help

See studies and variants in dbVar

Genotypes

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000018.10 Reference GRCh38.p14 Primary Assembly

    Range
    1363630..1392709 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007066438.1 RNA Sequence

  2. XR_007066437.1 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060942.1 Alternate T2T-CHM13v2.0

    Range
    1518127..1561734 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007088303.1 RNA Sequence

  2. XR_007088304.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Miscellaneous