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LOC105372088 uncharacterized LOC105372088 [ Homo sapiens (human) ]

Gene ID: 105372088, updated on 22-Oct-2024

Summary

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Gene symbol
LOC105372088
Gene description
uncharacterized LOC105372088
See related
Ensembl:ENSG00000297765
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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See LOC105372088 in Genome Data Viewer
Location:
18q12.3
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 18 NC_000018.10 (43810687..43933384, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 18 NC_060942.1 (44001593..44123920, complement)

Chromosome 18 - NC_000018.10Genomic Context describing neighboring genes Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr18:40323669-40324335 Neighboring gene Ras like without CAAX 2 Neighboring gene synaptotagmin 4 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr18:41065893-41067092 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr18:41168512-41169151 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr18:41339915-41340500 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr18:41426037-41426853 Neighboring gene uncharacterized LOC105372087 Neighboring gene RNA, U6 small nuclear 443, pseudogene Neighboring gene Sharpr-MPRA regulatory region 9153 Neighboring gene RNA, 5S ribosomal pseudogene 455 Neighboring gene inhibitor of Bruton tyrosine kinase pseudogene 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

Genotypes

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000018.10 Reference GRCh38.p14 Primary Assembly

    Range
    43810687..43933384 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_935415.3 RNA Sequence

    Related
    ENST00000750851.1

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060942.1 Alternate T2T-CHM13v2.0

    Range
    44001593..44123920 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007088362.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials