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LINC01912 long intergenic non-protein coding RNA 1912 [ Homo sapiens (human) ]

Gene ID: 105372175, updated on 10-Oct-2023

Summary

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Official Symbol
LINC01912provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 1912provided by HGNC
Primary source
HGNC:HGNC:52731
See related
AllianceGenome:HGNC:52731
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Restricted expression toward testis (RPKM 1.1) See more
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Genomic context

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See LINC01912 in Genome Data Viewer
Location:
18q22.1
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 18 NC_000018.10 (68258079..68264803, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 18 NC_060942.1 (68477225..68483951, complement)

Chromosome 18 - NC_000018.10Genomic Context describing neighboring genes Neighboring gene DSEL antisense RNA 1 Neighboring gene myotubularin related protein 14 pseudogene Neighboring gene long intergenic non-protein coding RNA 1903 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr18:65772919-65773527 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr18:65888487-65889038 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr18:66103358-66104557 Neighboring gene aldo-keto reductase family 1 member B10 pseudogene 2 Neighboring gene metallothionein-like 3, pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

See studies and variants in dbVar

Genotypes

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_183524.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC022968

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000018.10 Reference GRCh38.p14 Primary Assembly

    Range
    68258079..68264803 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060942.1 Alternate T2T-CHM13v2.0

    Range
    68477225..68483951 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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