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LOC105372432 uncharacterized LOC105372432 [ Homo sapiens (human) ]

Gene ID: 105372432, updated on 22-Oct-2024

Summary

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Gene symbol
LOC105372432
Gene description
uncharacterized LOC105372432
See related
Ensembl:ENSG00000286024
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Biased expression in kidney (RPKM 20.2), liver (RPKM 13.2) and 4 other tissues See more
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Genomic context

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See LOC105372432 in Genome Data Viewer
Location:
19q13.33
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 19 NC_000019.10 (48807369..48810837)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 19 NC_060943.1 (51801890..51805951)

Chromosome 19 - NC_000019.10Genomic Context describing neighboring genes Neighboring gene FGF21/FUT1 promoter region Neighboring gene fibroblast growth factor 21 Neighboring gene CRISPRi-FlowFISH-validated FUT1 regulatory element 4 Neighboring gene H3K27ac hESC enhancer GRCh37_chr19:49296757-49297257 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 14906 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 14907 Neighboring gene H3K27ac hESC enhancer GRCh37_chr19:49299377-49300012 Neighboring gene RNA, U6 small nuclear 317, pseudogene Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr19:49301825-49302433 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr19:49302434-49303042 Neighboring gene branched chain amino acid transaminase 2 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr19:49309749-49310420 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 14908 Neighboring gene Sharpr-MPRA regulatory region 11839 Neighboring gene CRISPRi-FlowFISH-validated BCAT2 regulatory element Neighboring gene H3K4me1 hESC enhancer GRCh37_chr19:49316517-49317128 Neighboring gene hydroxysteroid 17-beta dehydrogenase 14 Neighboring gene CRISPRi-FlowFISH-validated FTL regulatory element 1 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 10904 Neighboring gene MPRA-validated peak3541 silencer Neighboring gene Sharpr-MPRA regulatory region 3566 Neighboring gene pleckstrin homology domain containing A4 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 10905

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

Genotypes

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000019.10 Reference GRCh38.p14 Primary Assembly

    Range
    48807369..48810837
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007067287.1 RNA Sequence

  2. XR_936017.4 RNA Sequence

    Related
    ENST00000650724.4

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060943.1 Alternate T2T-CHM13v2.0

    Range
    51801890..51805951
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007089195.1 RNA Sequence

  2. XR_007089194.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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