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LOC105372630 uncharacterized LOC105372630 [ Homo sapiens (human) ]

Gene ID: 105372630, updated on 22-Oct-2024

Summary

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Gene symbol
LOC105372630
Gene description
uncharacterized LOC105372630
See related
Ensembl:ENSG00000290777
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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See LOC105372630 in Genome Data Viewer
Location:
20q13.12
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 20 NC_000020.11 (45230837..45290352)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 20 NC_060944.1 (46966717..47026214)

Chromosome 20 - NC_000020.11Genomic Context describing neighboring genes Neighboring gene semenogelin 1 Neighboring gene semenogelin 2 Neighboring gene uncharacterized LOC124904913 Neighboring gene secretory leukocyte peptidase inhibitor Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 12955 Neighboring gene matrilin 4 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 12956 Neighboring gene recombination signal binding protein for immunoglobulin kappa J region like Neighboring gene ATAC-STARR-seq lymphoblastoid active region 17946 Neighboring gene tRNA-Val (anticodon CAC) 14-1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

Genotypes

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000020.11 Reference GRCh38.p14 Primary Assembly

    Range
    45230837..45290352
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_936763.3 RNA Sequence

    Related
    ENST00000823196.1

  2. XR_936761.3 RNA Sequence

  3. XR_936768.3 RNA Sequence

  4. XR_936764.3 RNA Sequence

    Related
    ENST00000461248.2

  5. XR_936766.3 RNA Sequence

    Related
    ENST00000823205.1

  6. XR_936767.3 RNA Sequence

    Related
    ENST00000823206.1

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060944.1 Alternate T2T-CHM13v2.0

    Range
    46966717..47026214
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007089648.1 RNA Sequence

  2. XR_007089650.1 RNA Sequence

  3. XR_007089645.1 RNA Sequence

  4. XR_007089647.1 RNA Sequence

  5. XR_007089649.1 RNA Sequence

  6. XR_007089646.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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Research Materials