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LOC105372695 uncharacterized LOC105372695 [ Homo sapiens (human) ]

Gene ID: 105372695, updated on 10-Oct-2023

Summary

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Gene symbol
LOC105372695
Gene description
uncharacterized LOC105372695
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Restricted expression toward testis (RPKM 1.7) See more
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Genomic context

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Location:
20q13.32
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 20 NC_000020.11 (58773425..58774811)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 20 NC_060944.1 (60556033..60557419)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 20 NC_000020.10 (57348481..57349867)

Chromosome 20 - NC_000020.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124904942 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr20:57320681-57321180 Neighboring gene piezo type mechanosensitive ion channel component 1 pseudogene 2 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr20:57327629-57328292 Neighboring gene OCT4-NANOG-H3K4me1 hESC enhancer GRCh37_chr20:57328293-57328958 Neighboring gene OCT4-NANOG-H3K4me1 hESC enhancer GRCh37_chr20:57328959-57329622 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr20:57362050-57362726 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr20:57378241-57378944 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr20:57380351-57381052 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr20:57388251-57388750 Neighboring gene microRNA 296 Neighboring gene microRNA 298

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

Genotypes

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_134566.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    BX118153

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000020.11 Reference GRCh38.p14 Primary Assembly

    Range
    58773425..58774811
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060944.1 Alternate T2T-CHM13v2.0

    Range
    60556033..60557419
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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