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LOC105372704 uncharacterized LOC105372704 [ Homo sapiens (human) ]

Gene ID: 105372704, updated on 17-Jun-2024

Summary

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Gene symbol
LOC105372704
Gene description
uncharacterized LOC105372704
Gene type
protein coding
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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See LOC105372704 in Genome Data Viewer
Location:
20q13.33
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 20 NC_000020.11 (62000728..62002628, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 20 NC_060944.1 (63790065..63791965, complement)

Chromosome 20 - NC_000020.11Genomic Context describing neighboring genes Neighboring gene cadherin 4 Neighboring gene uncharacterized LOC100128310 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr20:60321925-60322425 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr20:60321424-60321924 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr20:60328223-60329209 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr20:60329210-60330195 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr20:60332068-60332568 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr20:60332569-60333069 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr20:60340987-60341560 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr20:60342316-60342816 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr20:60344183-60344683 Neighboring gene Sharpr-MPRA regulatory region 10002 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr20:60377656-60378176 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr20:60378177-60378697 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr20:60383971-60384684 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr20:60410329-60410830 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr20:60434505-60435006 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr20:60453666-60454166 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr20:60454167-60454667 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr20:60466559-60467058 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr20:60476138-60477031 Neighboring gene Sharpr-MPRA regulatory region 9437 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr20:60501357-60502556 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr20:60507695-60508426 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr20:60509158-60509888 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr20:60523619-60524118 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr20:60528727-60529226 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr20:60527344-60527916 Neighboring gene MPRA-validated peak4298 silencer Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr20:60538354-60539553 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr20:60540456-60541084 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr20:60541085-60541714 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr20:60551058-60551558 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr20:60551559-60552059 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr20:60564347-60565309 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr20:60578426-60578926 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr20:60578927-60579427 Neighboring gene microRNA 1257 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr20:60589023-60589524 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr20:60596697-60597476 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr20:60597477-60598254 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr20:60603061-60603696 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 18195 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 18196 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr20:60622502-60623100 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr20:60629188-60629688 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr20:60629689-60630189 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr20:60638627-60639140 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr20:60639141-60639655 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr20:60639656-60640169 Neighboring gene TATA-box binding protein associated factor 4 Neighboring gene ribosomal protein L17 pseudogene 48 Neighboring gene microRNA 3195

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

Genotypes

General protein information

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Preferred Names
uncharacterized protein LOC105372704

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000020.11 Reference GRCh38.p14 Primary Assembly

    Range
    62000728..62002628 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011529123.2 → XP_011527425.1  uncharacterized protein LOC105372704

    See identical proteins and their annotated locations for XP_011527425.1

Reference GRCh38.p14 ALT_REF_LOCI_1

Genomic

  1. NT_187623.1 Reference GRCh38.p14 ALT_REF_LOCI_1

    Range
    111315..113215 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011546890.2 → XP_011545192.1  uncharacterized protein LOC105372704

    See identical proteins and their annotated locations for XP_011545192.1

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060944.1 Alternate T2T-CHM13v2.0

    Range
    63790065..63791965 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_047446936.1 → XP_047302892.1  uncharacterized protein LOC105372704

Nucleotide Protein
Heading Accession and Version

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