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LOC105372957 uncharacterized LOC105372957 [ Homo sapiens (human) ]

Gene ID: 105372957, updated on 17-Sep-2024

Summary

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Gene symbol
LOC105372957
Gene description
uncharacterized LOC105372957
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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See LOC105372957 in Genome Data Viewer
Location:
22q11.23
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 22 NC_000022.11 (23566970..23573098)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 22 NC_060946.1 (24014187..24020317)

Chromosome 22 - NC_000022.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107985580 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:23871859-23872474 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr22:23874941-23875556 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr22:23876790-23877405 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr22:23877406-23878022 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr22:23878638-23879254 Neighboring gene endogenous retrovirus group K member 5 Gag polyprotein-like Neighboring gene Sharpr-MPRA regulatory region 4313 Neighboring gene Sharpr-MPRA regulatory regions 962 and 2236 Neighboring gene prostate cancer associated transcript 14 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:23891199-23891699 Neighboring gene Sharpr-MPRA regulatory region 8041 Neighboring gene immunoglobulin lambda like polypeptide 1 Neighboring gene aspartate rich 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

Genotypes

General gene information

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Clone Names

  • AP000345.2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000022.11 Reference GRCh38.p14 Primary Assembly

    Range
    23566970..23573098
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_938078.2 RNA Sequence

  2. XR_938075.2 RNA Sequence

  3. XR_938076.1 RNA Sequence

  4. XR_938077.2 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060946.1 Alternate T2T-CHM13v2.0

    Range
    24014187..24020317
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007090506.1 RNA Sequence

  2. XR_007090505.1 RNA Sequence

  3. XR_007090508.1 RNA Sequence

  4. XR_007090507.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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