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LOC105373722 uncharacterized LOC105373722 [ Homo sapiens (human) ]

Gene ID: 105373722, updated on 17-Sep-2024

Summary

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Gene symbol
LOC105373722
Gene description
uncharacterized LOC105373722
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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See LOC105373722 in Genome Data Viewer
Location:
2q24.2
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (161883622..161913189, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (162340216..162369784, complement)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene MTNAP1 pseudogene 1 Neighboring gene keratin 18 pseudogene 46 Neighboring gene solute carrier family 4 member 10 Neighboring gene H3K27ac hESC enhancer GRCh37_chr2:162603100-162603600 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_54812 Neighboring gene ribulose-5-phosphate-3-epimerase pseudogene 5 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:162854969-162855469 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_54939 Neighboring gene dipeptidyl peptidase 4 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 16715 Neighboring gene Sharpr-MPRA regulatory region 3711 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 16716 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 12061

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

Genotypes

General gene information

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Homology

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

    Range
    161883622..161913189 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_001739758.2 RNA Sequence

  2. XR_001739757.2 RNA Sequence

  3. XR_923532.3 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060926.1 Alternate T2T-CHM13v2.0

    Range
    162340216..162369784 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007072603.1 RNA Sequence

  2. XR_007072601.1 RNA Sequence

  3. XR_007072602.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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