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LOC105373724 uncharacterized LOC105373724 [ Homo sapiens (human) ]

Gene ID: 105373724, updated on 10-Oct-2023

Summary

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Gene symbol
LOC105373724
Gene description
uncharacterized LOC105373724
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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Location:
2q24.2
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (162246117..162261156)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (162702747..162717810)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC101929532 Neighboring gene GCG promoter region Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_54994 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_55025 Neighboring gene glucagon Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_55061 Neighboring gene fibroblast activation protein alpha Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_55125 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 12062 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr2:163175227-163176426 Neighboring gene interferon induced with helicase C domain 1 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 16718 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 12063 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 12064 Neighboring gene grancalcin Neighboring gene potassium voltage-gated channel subfamily H member 7

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

Genotypes

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

    Range
    162246117..162261156
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_923544.3 RNA Sequence

  2. XR_007087276.1 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060926.1 Alternate T2T-CHM13v2.0

    Range
    162702747..162717810
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007072604.1 RNA Sequence

  2. XR_007072605.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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