U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC105374211 uncharacterized LOC105374211 [ Homo sapiens (human) ]

Gene ID: 105374211, updated on 17-Sep-2024

Summary

Go to the top of the page Help
Gene symbol
LOC105374211
Gene description
uncharacterized LOC105374211
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC105374211 in Genome Data Viewer
Location:
3q26.2
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 3 NC_000003.12 (170767915..170837623)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 3 NC_060927.1 (173552246..173621958)

Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene SLC7A14 antisense RNA 1 Neighboring gene NANOG hESC enhancer GRCh37_chr3:170395666-170396167 Neighboring gene ribosomal protein L28 pseudogene 1 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr3:170399438-170400156 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr3:170406280-170406852 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr3:170406853-170407425 Neighboring gene uncharacterized LOC124906302 Neighboring gene Sharpr-MPRA regulatory region 4779 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr3:170535382-170535959 Neighboring gene NANOG hESC enhancer GRCh37_chr3:170553092-170553655 Neighboring gene MPRA-validated peak4920 silencer Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20807 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:170587696-170588422 Neighboring gene RNY5 pseudogene 3 Neighboring gene ribosomal protein L22 like 1

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help
  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

Phenotypes

Go to the top of the page Help

Review eQTL and phenotype association data in this region using PheGenI

Variation

Go to the top of the page Help

See studies and variants in dbVar

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000003.12 Reference GRCh38.p14 Primary Assembly

    Range
    170767915..170837623
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_924701.2 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060927.1 Alternate T2T-CHM13v2.0

    Range
    173552246..173621958
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007073967.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials