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LOC105375186 uncharacterized LOC105375186 [ Homo sapiens (human) ]

Gene ID: 105375186, updated on 17-Sep-2024

Summary

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Gene symbol
LOC105375186
Gene description
uncharacterized LOC105375186
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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See LOC105375186 in Genome Data Viewer
Location:
7p15.3
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 7 NC_000007.14 (23077702..23099195, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 7 NC_060931.1 (23214231..23235720, complement)

Chromosome 7 - NC_000007.14Genomic Context describing neighboring genes Neighboring gene hyccin PI4KA lipid kinase complex subunit 1 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr7:23028535-23029046 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr7:23029047-23029557 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25713 Neighboring gene H3K27ac hESC enhancer GRCh37_chr7:23052451-23053132 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 18005 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25714 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25715 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr7:23060419-23061618 Neighboring gene uncharacterized LOC105375185 Neighboring gene H3K27ac hESC enhancer GRCh37_chr7:23144592-23145578 Neighboring gene H3K27ac hESC enhancer GRCh37_chr7:23145579-23146565 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:23153733-23154678 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr7:23155468-23156110 Neighboring gene KLHL7 divergent transcript Neighboring gene kelch like family member 7 Neighboring gene AK3 pseudogene 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

Genotypes

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000007.14 Reference GRCh38.p14 Primary Assembly

    Range
    23077702..23099195 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_927096.2 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060931.1 Alternate T2T-CHM13v2.0

    Range
    23214231..23235720 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007078314.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Research Materials