U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC105375218 uncharacterized LOC105375218 [ Homo sapiens (human) ]

Gene ID: 105375218, updated on 10-Oct-2023

Summary

Go to the top of the page Help
Gene symbol
LOC105375218
Gene description
uncharacterized LOC105375218
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
7p14.3
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 7 NC_000007.14 (30247427..30286085, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 7 NC_060931.1 (30385124..30423778, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 7 NC_000007.13 (30287043..30325701, complement)

Chromosome 7 - NC_000007.14Genomic Context describing neighboring genes Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr7:30208325-30209524 Neighboring gene uncharacterized LOC105375217 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25806 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 18059 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25807 Neighboring gene ribosomal protein S27 pseudogene 16 Neighboring gene uncharacterized LOC124901607 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25808 Neighboring gene HNF1 motif-containing MPRA enhancer 259 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25809 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 18060 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 18061 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 18062 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 18063 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 18064 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 18065 Neighboring gene microRNA 550a-1 Neighboring gene microRNA 550b-1 Neighboring gene zinc and ring finger 2 Neighboring gene ReSE screen-validated silencer GRCh37_chr7:30358457-30358625 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25810 Neighboring gene Sharpr-MPRA regulatory region 6335 Neighboring gene uncharacterized protein DKFZp586I1420

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help
  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

Phenotypes

Go to the top of the page Help

Review eQTL and phenotype association data in this region using PheGenI

Variation

Go to the top of the page Help

See variants in ClinVar

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

Genotypes

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_136267.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    BQ016111, KR024020

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000007.14 Reference GRCh38.p14 Primary Assembly

    Range
    30247427..30286085 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060931.1 Alternate T2T-CHM13v2.0

    Range
    30385124..30423778 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases