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MIR3150BHG MIR3150B host gene [ Homo sapiens (human) ]

Gene ID: 105375650, updated on 17-Sep-2024

Summary

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Official Symbol
MIR3150BHGprovided by HGNC
Official Full Name
MIR3150B host geneprovided by HGNC
Primary source
HGNC:HGNC:52000
See related
Ensembl:ENSG00000245080 AllianceGenome:HGNC:52000
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Biased expression in testis (RPKM 5.7), lymph node (RPKM 0.6) and 1 other tissue See more
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Genomic context

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See MIR3150BHG in Genome Data Viewer
Location:
8q22.1
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 8 NC_000008.11 (95066808..95073182, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 8 NC_060932.1 (96192088..96198462, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 8 NC_000008.10 (96079036..96085410, complement)

Chromosome 8 - NC_000008.11Genomic Context describing neighboring genes Neighboring gene NADH:ubiquinone oxidoreductase complex assembly factor 6 Neighboring gene RNA, U6 small nuclear 1209, pseudogene Neighboring gene uncharacterized LOC124901981 Neighboring gene uncharacterized LOC124901980 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19379 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27640 Neighboring gene microRNA 3150b Neighboring gene microRNA 3150a Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27641 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27642 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27643 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27644 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27645 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19380 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27646 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27647 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19381 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19382 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27648 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19383 Neighboring gene pleckstrin homology and FYVE domain containing 2 Neighboring gene uncharacterized LOC124901982 Neighboring gene CRISPRi-validated cis-regulatory element chr8.2347 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19384 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27649 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27650

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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Related articles in PubMed

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. Ota T, et al. Nat Genet, 2004 Jan. PMID 14702039
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See Variation Viewer (GRCh37.p13)

General gene information

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Clone Names

  • FLJ35871

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_132986.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longer transcript.
    Source sequence(s)
    AC068189

  2. NR_132987.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) lacks one exon and includes an alternate exon, compared to variant 1.
    Source sequence(s)
    AC068189
    Related
    ENST00000501164.2

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000008.11 Reference GRCh38.p14 Primary Assembly

    Range
    95066808..95073182 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060932.1 Alternate T2T-CHM13v2.0

    Range
    96192088..96198462 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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