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LOC105375903 uncharacterized LOC105375903 [ Homo sapiens (human) ]

Gene ID: 105375903, updated on 22-Oct-2024

Summary

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Gene symbol
LOC105375903
Gene description
uncharacterized LOC105375903
See related
Ensembl:ENSG00000254288
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Biased expression in placenta (RPKM 1.3), brain (RPKM 0.1) and 2 other tissues See more
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Genomic context

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See LOC105375903 in Genome Data Viewer
Location:
8q21.11
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 8 NC_000008.11 (74199382..74208281)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 8 NC_060932.1 (74628642..74637541)

Chromosome 8 - NC_000008.11Genomic Context describing neighboring genes Neighboring gene lymphocyte antigen 96 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:74990404-74990904 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:74990905-74991405 Neighboring gene RPS3A pseudogene 32 Neighboring gene RNA, U6 small nuclear 1197, pseudogene Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27541 Neighboring gene MPRA-validated peak7074 silencer Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr8:75193255-75194454 Neighboring gene junctophilin 1 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19299 Neighboring gene H3K27ac hESC enhancer GRCh37_chr8:75213303-75213804 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:75232842-75233732 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19300 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27542 Neighboring gene ganglioside induced differentiation associated protein 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

Genotypes

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000008.11 Reference GRCh38.p14 Primary Assembly

    Range
    74199382..74208281
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_001745956.1 RNA Sequence

    Related
    ENST00000522339.2

  2. XR_929052.2 RNA Sequence

    Related
    ENST00000756612.1

  3. XR_929053.2 RNA Sequence

    Related
    ENST00000756611.1

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060932.1 Alternate T2T-CHM13v2.0

    Range
    74628642..74637541
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007079142.1 RNA Sequence

  2. XR_007079141.1 RNA Sequence

  3. XR_007079140.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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Research Materials