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LOC105376326 uncharacterized LOC105376326 [ Homo sapiens (human) ]

Gene ID: 105376326, updated on 22-Oct-2024

Summary

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Gene symbol
LOC105376326
Gene description
uncharacterized LOC105376326
See related
Ensembl:ENSG00000305683
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Biased expression in testis (RPKM 1.0), lymph node (RPKM 0.2) and 7 other tissues See more
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Genomic context

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See LOC105376326 in Genome Data Viewer
Location:
9q34.3
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 9 NC_000009.12 (136884780..136886254, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 9 NC_060933.1 (149118954..149120430, complement)

Chromosome 9 - NC_000009.12Genomic Context describing neighboring genes Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:139752096-139752733 Neighboring gene MAM domain containing 4 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 20555 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 20556 Neighboring gene endothelial differentiation related factor 1 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 20557 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 29330 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 29331 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 29332 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 29333 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 29334 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 20558 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:139780929-139781664 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:139781665-139782400 Neighboring gene TNF receptor associated factor 2 Neighboring gene microRNA 4479 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 29335 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 29336 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:139831896-139832509 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:139832510-139833122 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:139837603-139838368 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 20561 Neighboring gene F-box and WD repeat domain containing 5

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

Genotypes

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000009.12 Reference GRCh38.p14 Primary Assembly

    Range
    136884780..136886254 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_930448.2 RNA Sequence

    Related
    ENST00000812375.1

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060933.1 Alternate T2T-CHM13v2.0

    Range
    149118954..149120430 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007080145.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials