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RASSF10-DT RASSF10 divergent transcript [ Homo sapiens (human) ]

Gene ID: 105376557, updated on 10-Oct-2023

Summary

Official Symbol
RASSF10-DTprovided by HGNC
Official Full Name
RASSF10 divergent transcriptprovided by HGNC
Primary source
HGNC:HGNC:54255
See related
AllianceGenome:HGNC:54255
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
LINC02738
Expression
Low expression observed in reference dataset See more
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Genomic context

See RASSF10-DT in Genome Data Viewer
Location:
11p15.3
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 11 NC_000011.10 (12991501..13009116, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 11 NC_060935.1 (13084019..13101693, complement)

Chromosome 11 - NC_000011.10Genomic Context describing neighboring genes Neighboring gene TEA domain transcription factor 1 Neighboring gene uncharacterized LOC124900312 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr11:12935478-12936342 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr11:12936343-12937206 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 3164 Neighboring gene long intergenic non-protein coding RNA 958 Neighboring gene Ras association domain family member 10 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr11:13094694-13095893 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr11:13123413-13124371 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:13132777-13133277 Neighboring gene uncharacterized LOC105376558

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General gene information

Other Names

  • CTC-497E21.3
  • long intergenic non-protein coding RNA 2738

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_187417.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC084859
  2. NR_187418.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC084859
  3. NR_187419.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC084859

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000011.10 Reference GRCh38.p14 Primary Assembly

    Range
    12991501..13009116 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060935.1 Alternate T2T-CHM13v2.0

    Range
    13084019..13101693 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)