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LOC105376709 uncharacterized LOC105376709 [ Homo sapiens (human) ]

Gene ID: 105376709, updated on 10-Oct-2023

Summary

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Gene symbol
LOC105376709
Gene description
uncharacterized LOC105376709
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Restricted expression toward testis (RPKM 1.5) See more
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Genomic context

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Location:
15q13.3
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 15 NC_000015.10 (32356351..32358631, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 15 NC_060939.1 (30151050..30153330, complement)

Chromosome 15 - NC_000015.10Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102724078 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr15:32584971-32585470 Neighboring gene RNA, U6 small nuclear 18, pseudogene Neighboring gene hyperpolarization activated cyclic nucleotide gated potassium and sodium channel 2 pseudogene Neighboring gene H3K4me1 hESC enhancer GRCh37_chr15:32644691-32645237 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr15:32645238-32645783 Neighboring gene uncharacterized LOC112268159 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr15:32679479-32679978 Neighboring gene dynamin 1 pseudogene 31

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

Genotypes

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000015.10 Reference GRCh38.p14 Primary Assembly

    Range
    32356351..32358631 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007064572.1 RNA Sequence

  2. XR_932069.4 RNA Sequence

Reference GRCh38.p14 PATCHES

Genomic

  1. NW_012132920.1 Reference GRCh38.p14 PATCHES

    Range
    168981..171261
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007068964.1 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060939.1 Alternate T2T-CHM13v2.0

    Range
    30151050..30153330 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007085843.1 RNA Sequence

  2. XR_007085842.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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