U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC105377156 uncharacterized LOC105377156 [ Homo sapiens (human) ]

Gene ID: 105377156, updated on 10-Oct-2023

Summary

Go to the top of the page Help
Gene symbol
LOC105377156
Gene description
uncharacterized LOC105377156
See related
Ensembl:ENSG00000287131
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Restricted expression toward testis (RPKM 1.3) See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
3p13
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 3 NC_000003.12 (71785342..71789374)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 3 NC_060927.1 (71824573..71828605)

Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene eukaryotic translation initiation factor 4E family member 3 Neighboring gene G protein-coupled receptor 27 Neighboring gene prokineticin 2 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:71864572-71865144 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr3:71865145-71865717 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr3:71866364-71867052 Neighboring gene RNA, 7SL, cytoplasmic 271, pseudogene Neighboring gene NANOG hESC enhancer GRCh37_chr3:71922109-71922645 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:71924591-71925522 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:71926453-71927384 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:71956813-71957604 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:71970346-71970846 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr3:71974040-71974906 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:71974907-71975774 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:71976973-71977838 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 14523 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 14524 Neighboring gene ReSE screen-validated silencer GRCh37_chr3:72023234-72023416 Neighboring gene H3K27ac hESC enhancer GRCh37_chr3:72027929-72028603 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr3:72031234-72032433 Neighboring gene uncharacterized LOC105377157

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help
  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

Phenotypes

Go to the top of the page Help

Review eQTL and phenotype association data in this region using PheGenI

Variation

Go to the top of the page Help

See studies and variants in dbVar

Genotypes

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000003.12 Reference GRCh38.p14 Primary Assembly

    Range
    71785342..71789374
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_940955.3 RNA Sequence

  2. XR_001740744.2 RNA Sequence

  3. XR_001740746.2 RNA Sequence

  4. XR_001740745.2 RNA Sequence

  5. XR_007095958.1 RNA Sequence

    Related
    ENST00000658676.1

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060927.1 Alternate T2T-CHM13v2.0

    Range
    71824573..71828605
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007073616.1 RNA Sequence

  2. XR_007073613.1 RNA Sequence

  3. XR_007073615.1 RNA Sequence

  4. XR_007073614.1 RNA Sequence

  5. XR_007073612.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases