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LOC105377989 uncharacterized LOC105377989 [ Homo sapiens (human) ]

Gene ID: 105377989, updated on 17-Sep-2024

Summary

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Gene symbol
LOC105377989
Gene description
uncharacterized LOC105377989
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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See LOC105377989 in Genome Data Viewer
Location:
6q22.33
Exon count:
15
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 6 NC_000006.12 (126865267..127212844, complement)

Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105377992 Neighboring gene uncharacterized LOC105377993 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25037 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25038 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 17525 Neighboring gene ribosomal protein S4X pseudogene 9 Neighboring gene uncharacterized LOC105377991 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr6:127297370-127297940 Neighboring gene R-spondin 3 Neighboring gene uncharacterized LOC124901398 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 17526 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 17527 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25039 Neighboring gene ring finger protein 146

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000006.12 Chromosome 6 Reference GRCh38.p14 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

Genotypes

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000006.12 Reference GRCh38.p14 Primary Assembly

    Range
    126865267..127212844 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_002956387.2 RNA Sequence

  2. XR_007059748.1 RNA Sequence

  3. XR_007059747.1 RNA Sequence

  4. XR_007059745.1 RNA Sequence

  5. XR_007059746.1 RNA Sequence

  6. XR_007059744.1 RNA Sequence

  7. XR_007059743.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials