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LINC03029 long intergenic non-protein coding RNA 3029 [ Homo sapiens (human) ]

Gene ID: 105378292, updated on 10-Oct-2023

Summary

Official Symbol
LINC03029provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 3029provided by HGNC
Primary source
HGNC:HGNC:56169
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

Location:
10q11.22
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 10 NC_000010.11 (47413387..47414475, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 10 NC_060934.1 (48304688..48305776, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 10 NC_000010.10 (48324887..48325975)

Chromosome 10 - NC_000010.11Genomic Context describing neighboring genes Neighboring gene H3K27ac hESC enhancer GRCh37_chr10:48354663-48355162 Neighboring gene uncharacterized LOC107001062 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr10:48324479-48325678 Neighboring gene uncharacterized LOC124902420 Neighboring gene retinol binding protein 3 Neighboring gene zinc finger protein 488 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:47777655-47778618 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:48276917-48277572 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:47168559-47169492 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:48257259-48257771 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:48255153-48256053 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:48254252-48255152 Neighboring gene annexin A8 Neighboring gene family with sequence similarity 25 member G

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_134499.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL731561, AW592705, BX101243

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000010.11 Reference GRCh38.p14 Primary Assembly

    Range
    47413387..47414475 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060934.1 Alternate T2T-CHM13v2.0

    Range
    48304688..48305776 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)