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LOC105378329 uncharacterized LOC105378329 [ Homo sapiens (human) ]

Gene ID: 105378329, updated on 17-Sep-2024

Summary

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Gene symbol
LOC105378329
Gene description
uncharacterized LOC105378329
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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See LOC105378329 in Genome Data Viewer
Location:
10q21.3
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 10 NC_000010.11 (63591782..63625113, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 10 NC_060934.1 (64449907..64483508, complement)

Chromosome 10 - NC_000010.11Genomic Context describing neighboring genes Neighboring gene jumonji domain containing 1C Neighboring gene JMJD1C antisense RNA 2 Neighboring gene H3K27ac hESC enhancer GRCh37_chr10:65224969-65225758 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3440 Neighboring gene JMJD1C antisense RNA 1 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3441 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 2409 Neighboring gene receptor accessory protein 3 Neighboring gene Sharpr-MPRA regulatory region 5662 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3442 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3443 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3444 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 2410 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 2411 Neighboring gene uncharacterized LOC107984238 Neighboring gene uncharacterized LOC101929846 Neighboring gene mitochondrial ribosomal protein L35 pseudogene 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

Genotypes

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000010.11 Reference GRCh38.p14 Primary Assembly

    Range
    63591782..63625113 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_001747467.3 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060934.1 Alternate T2T-CHM13v2.0

    Range
    64449907..64483508 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007081345.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases
Research Materials