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Idh isocitrate dehydrogenase [NADP] cytoplasmic [ Plutella xylostella (diamondback moth) ]

Gene ID: 105385377, updated on 24-May-2024

Summary

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Gene symbol
Idh
Gene description
isocitrate dehydrogenase [NADP] cytoplasmic
Locus tag
PLXY1_LOCUS13315
See related
EnsemblRapid:ENSPXYG00000002186
Gene type
protein coding
RefSeq status
MODEL
Organism
Plutella xylostella
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Yponomeutoidea; Plutellidae; Plutella
Orthologs
fruit fly all
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Genomic context

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See Idh in Genome Data Viewer
Location:
chromosome: 10
Exon count:
2
Annotation release Status Assembly Chr Location
103 current ilPluXylo3.1 (GCF_932276165.1) 10 NC_063990.1 (4451934..4457411)
102 previous assembly Haplomerged_assembly (GCF_905116875.1) Unplaced Scaffold NW_024011342.1 (4400434..4405982)

Chromosome 10 - NC_063990.1Genomic Context describing neighboring genes Neighboring gene RNA-binding protein 6 Neighboring gene uncharacterized LOC119693694 Neighboring gene uncharacterized LOC105385378 Neighboring gene sugar transporter SWEET1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables NAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables isocitrate dehydrogenase (NADP+) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables magnesium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in isocitrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in peroxisome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
isocitrate dehydrogenase [NADP] cytoplasmic

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Plutella xylostella Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ilPluXylo3.1

Genomic

  1. NC_063990.1 Reference ilPluXylo3.1

    Range
    4451934..4457411
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038117924.2 → XP_037973852.1  isocitrate dehydrogenase [NADP] cytoplasmic

    UniProtKB/TrEMBL
    A0A8S4DCA9
    Related
    ENSPXYP00000001959.1, ENSPXYT00000003398.1
    Conserved Domains (1) summary
    PTZ00435
    Location:1 → 409
    PTZ00435; isocitrate dehydrogenase; Provisional
Nucleotide Protein
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