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LOC105664392 cytochrome c1-2, heme protein, mitochondrial-like [ Megachile rotundata (alfalfa leafcutting bee) ]

Gene ID: 105664392, updated on 2-Oct-2024

Summary

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Gene symbol
LOC105664392
Gene description
cytochrome c1-2, heme protein, mitochondrial-like
See related
EnsemblRapid:LOC105664392
Gene type
protein coding
RefSeq status
MODEL
Organism
Megachile rotundata
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Apoidea; Anthophila; Megachilidae; Megachilinae; Megachile
Orthologs
honey bee all
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Genomic context

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See LOC105664392 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
101 current MROT_1.0 (GCF_000220905.1) Unplaced Scaffold NW_003797055.1 (861250..867413)

NW_003797055.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105661755 Neighboring gene histone deacetylase 4 Neighboring gene uncharacterized LOC100875024 Neighboring gene transmembrane protein 222 Neighboring gene CUB and LDLa domain

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003797055.1 Unplaced Scaffold Reference MROT_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables electron transfer activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables heme binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitochondrial electron transport, ubiquinol to cytochrome c IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cytochrome c1, heme protein, mitochondrial-like; cytochrome c1-2, heme protein, mitochondrial-like; uncharacterized protein LOC105664392

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Megachile rotundata Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MROT_1.0

Genomic

  1. NW_003797055.1 Reference MROT_1.0

    Range
    861250..867413
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012299074.1 → XP_012154464.1  uncharacterized protein LOC105664392 isoform X2

    Related
    XP_012154464.1, XM_012299074.1
    Conserved Domains (2) summary
    COG2857
    Location:82 → 169
    CYT1; Cytochrome c1 [Energy production and conversion]
    cl21467
    Location:82 → 175
    Cytochrom_C; Cytochrome c

  2. XM_012299067.1 → XP_012154457.1  cytochrome c1, heme protein, mitochondrial-like isoform X1

    Related
    XP_012154457.1, XM_012299067.1
    Conserved Domains (2) summary
    COG2857
    Location:37 → 211
    CYT1; Cytochrome c1 [Energy production and conversion]
    cl21467
    Location:66 → 217
    Cytochrom_C; Cytochrome c

  3. XM_012299080.1 → XP_012154470.1  cytochrome c1-2, heme protein, mitochondrial-like isoform X3

    Related
    XP_012154470.1, XM_012299080.1
    Conserved Domains (2) summary
    COG2857
    Location:37 → 284
    CYT1; Cytochrome c1 [Energy production and conversion]
    pfam02167
    Location:66 → 284
    Cytochrom_C1; Cytochrome C1 family
Nucleotide Protein
Heading Accession and Version

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