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LOC105960166 non-specific phospholipase C1-like [ Erythranthe guttata (spotted monkey flower) ]

Gene ID: 105960166, updated on 22-Oct-2023

Summary

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Gene symbol
LOC105960166
Gene description
non-specific phospholipase C1-like
Locus tag
MIMGU_mgv1a020087mg
Gene type
protein coding
RefSeq status
MODEL
Organism
Erythranthe guttata
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Annotation information
Annotation category: partial on reference assembly
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Genomic context

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See LOC105960166 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
100 current Mimgu1_0 (GCF_000504015.1) Unplaced Scaffold NW_012192835.1 (663479..670054)

NW_012192835.1Genomic Context describing neighboring genes Neighboring gene Werner syndrome ATP-dependent helicase-like Neighboring gene non-specific phospholipase C1-like Neighboring gene glycerophosphodiester phosphodiesterase GDPD6-like Neighboring gene probable NAD(P)H dehydrogenase (quinone) FQR1-like 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012192835.1 Unplaced Scaffold Reference Mimgu1_0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hydrolase activity, acting on ester bonds IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phospholipid catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
non-specific phospholipase C1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Erythranthe guttata Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mimgu1_0 Primary Assembly

Genomic

  1. NW_012192835.1 Reference Mimgu1_0 Primary Assembly

    Range
    663479..670054
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012984342.1 → XP_012839796.1  non-specific phospholipase C1-like

    UniProtKB/TrEMBL
    A0A022S1E9
    Conserved Domains (1) summary
    pfam04185
    Location:41 → 400
    Phosphoesterase; Phosphoesterase family
Nucleotide Protein
Heading Accession and Version

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