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LOC105960239 uncharacterized LOC105960239 [ Erythranthe guttata (spotted monkey flower) ]

Gene ID: 105960239, updated on 3-Jun-2019

Summary

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Gene symbol
LOC105960239
Gene description
uncharacterized LOC105960239
Gene type
protein coding
RefSeq status
MODEL
Organism
Erythranthe guttata
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Genomic context

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See LOC105960239 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
100 current Mimgu1_0 (GCF_000504015.1) Unplaced Scaffold NW_012192835.1 (885505..889791, complement)

NW_012192835.1Genomic Context describing neighboring genes Neighboring gene probable anion transporter 4, chloroplastic Neighboring gene UPF0503 protein At3g09070, chloroplastic Neighboring gene AT-rich interactive domain-containing protein 2-like Neighboring gene protein NRT1/ PTR FAMILY 8.2-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012192835.1 Unplaced Scaffold Reference Mimgu1_0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
uncharacterized protein LOC105960239

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Erythranthe guttata Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mimgu1_0 Primary Assembly

Genomic

  1. NW_012192835.1 Reference Mimgu1_0 Primary Assembly

    Range
    885505..889791 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012984408.1 → XP_012839862.1  uncharacterized protein LOC105960239

    Conserved Domains (4) summary
    cd00303
    Location:604 → 686
    retropepsin_like; Retropepsins; pepsin-like aspartate proteases
    cd01647
    Location:1134 → 1311
    RT_LTR; RT_LTR: Reverse transcriptases (RTs) from retrotransposons and retroviruses which have long terminal repeats (LTRs) in their DNA copies but not in their RNA template. RT catalyzes DNA replication from an RNA template, and is responsible for the ...
    pfam03732
    Location:239 → 329
    Retrotrans_gag; Retrotransposon gag protein
    pfam00078
    Location:1151 → 1311
    RVT_1; Reverse transcriptase (RNA-dependent DNA polymerase)
Nucleotide Protein
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