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LOC105960283 transcription repressor OFP3 [ Erythranthe guttata (spotted monkey flower) ]

Gene ID: 105960283, updated on 22-Oct-2023

Summary

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Gene symbol
LOC105960283
Gene description
transcription repressor OFP3
Locus tag
MIMGU_mgv1a021422mg
Gene type
protein coding
RefSeq status
MODEL
Organism
Erythranthe guttata
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Genomic context

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See LOC105960283 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
1
Annotation release Status Assembly Chr Location
100 current Mimgu1_0 (GCF_000504015.1) Unplaced Scaffold NW_012192835.1 (36481..37677, complement)

NW_012192835.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105959507 Neighboring gene uncharacterized LOC105960275 Neighboring gene uncharacterized LOC105959516 Neighboring gene transcription repressor OFP17-like Neighboring gene CBL-interacting serine/threonine-protein kinase 10-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012192835.1 Unplaced Scaffold Reference Mimgu1_0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcription repressor OFP3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Erythranthe guttata Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mimgu1_0 Primary Assembly

Genomic

  1. NW_012192835.1 Reference Mimgu1_0 Primary Assembly

    Range
    36481..37677 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012984452.1 → XP_012839906.1  transcription repressor OFP3

    See identical proteins and their annotated locations for XP_012839906.1

    UniProtKB/TrEMBL
    A0A022S099
    Conserved Domains (2) summary
    pfam04844
    Location:283 → 339
    Ovate; Transcriptional repressor, ovate
    pfam13724
    Location:1 → 40
    DNA_binding_2; DNA-binding domain
Nucleotide Protein
Heading Accession and Version

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