U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC105960307 codeine O-demethylase-like [ Erythranthe guttata (spotted monkey flower) ]

Gene ID: 105960307, updated on 22-Oct-2023

Summary

Go to the top of the page Help
Gene symbol
LOC105960307
Gene description
codeine O-demethylase-like
Locus tag
MIMGU_mgv1a009289mg
Gene type
protein coding
RefSeq status
MODEL
Organism
Erythranthe guttata
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC105960307 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
100 current Mimgu1_0 (GCF_000504015.1) Unplaced Scaffold NW_012192835.1 (100191..103036)

NW_012192835.1Genomic Context describing neighboring genes Neighboring gene RNA-directed DNA methylation 4 Neighboring gene protein LURP-one-related 7 Neighboring gene U2 small nuclear ribonucleoprotein B'' Neighboring gene cation/H(+) antiporter 15-like

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_012192835.1 Unplaced Scaffold Reference Mimgu1_0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
codeine O-demethylase-like

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Erythranthe guttata Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mimgu1_0 Primary Assembly

Genomic

  1. NW_012192835.1 Reference Mimgu1_0 Primary Assembly

    Range
    100191..103036
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012984474.1 → XP_012839928.1  codeine O-demethylase-like

    See identical proteins and their annotated locations for XP_012839928.1

    UniProtKB/TrEMBL
    A0A022S0A9
    Conserved Domains (3) summary
    PLN02750
    Location:1 → 347
    PLN02750; oxidoreductase, 2OG-Fe(II) oxygenase family protein
    pfam03171
    Location:192 → 292
    2OG-FeII_Oxy; 2OG-Fe(II) oxygenase superfamily
    pfam14226
    Location:26 → 147
    DIOX_N; non-haem dioxygenase in morphine synthesis N-terminal
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases