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ALG1L10P ALG1 like 10, pseudogene [ Homo sapiens (human) ]

Gene ID: 106479037, updated on 17-Sep-2024

Summary

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Official Symbol
ALG1L10Pprovided by HGNC
Official Full Name
ALG1 like 10, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:44379
See related
Ensembl:ENSG00000254016 AllianceGenome:HGNC:44379
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See ALG1L10P in Genome Data Viewer
Location:
12p13.31
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 12 NC_000012.12 (8227734..8231764)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 12 NC_060936.1 (8241813..8245836)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 12 NC_000012.11 (8380330..8384360)

Chromosome 12 - NC_000012.12Genomic Context describing neighboring genes Neighboring gene family with sequence similarity 66 member C Neighboring gene defensin beta 109F (pseudogene) Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr12:8375857-8377056 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 5931 Neighboring gene family with sequence similarity 90 member A1 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:8390159-8390659 Neighboring gene family with sequence similarity 86, member A pseudogene Neighboring gene long intergenic non-protein coding RNA 2449 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 4209 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 4210 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 4211 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 4212 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 4213 Neighboring gene uncharacterized LOC112268090 Neighboring gene H3K27ac hESC enhancer GRCh37_chr12:8396767-8397266 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr12:8404422-8404982 Neighboring gene ectonucleotide pyrophosphatase/phosphodiesterase 7 pseudogene 5

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

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Other Names

  • asparagine-linked glycosylation 1-like 10, pseudogene

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_044399.1 

    Range
    101..4131
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000012.12 Reference GRCh38.p14 Primary Assembly

    Range
    8227734..8231764
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060936.1 Alternate T2T-CHM13v2.0

    Range
    8241813..8245836
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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