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RNU6-519P RNA, U6 small nuclear 519, pseudogene [ Homo sapiens (human) ]

Gene ID: 106479796, updated on 17-Sep-2024

Summary

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Official Symbol
RNU6-519Pprovided by HGNC
Official Full Name
RNA, U6 small nuclear 519, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:47482
See related
Ensembl:ENSG00000222522 AllianceGenome:HGNC:47482
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See RNU6-519P in Genome Data Viewer
Location:
8q11.21
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 8 NC_000008.11 (47979414..47979521)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 8 NC_060932.1 (48355662..48355769)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 8 NC_000008.10 (48891974..48892081)

Chromosome 8 - NC_000008.11Genomic Context describing neighboring genes Neighboring gene protein kinase, DNA-activated, catalytic subunit Neighboring gene uncharacterized LOC105375818 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:48867403-48867904 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27331 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19176 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19177 Neighboring gene origin of replication upstream of MCM4 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19178 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19179 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:48909281-48909780 Neighboring gene minichromosome maintenance complex component 4 Neighboring gene UBE2V2 antisense RNA 1 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19180 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19181 Neighboring gene ubiquitin conjugating enzyme E2 V2 Neighboring gene H3K27ac hESC enhancer GRCh37_chr8:48947276-48947776 Neighboring gene H3K27ac hESC enhancer GRCh37_chr8:48947777-48948277 Neighboring gene MPRA-validated peak7010 silencer Neighboring gene uncharacterized LOC107986941 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:49017963-49018613

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_044324.1 

    Range
    101..208
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000008.11 Reference GRCh38.p14 Primary Assembly

    Range
    47979414..47979521
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060932.1 Alternate T2T-CHM13v2.0

    Range
    48355662..48355769
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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