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RNU6-551P RNA, U6 small nuclear 551, pseudogene [ Homo sapiens (human) ]

Gene ID: 106479811, updated on 17-Sep-2024

Summary

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Official Symbol
RNU6-551Pprovided by HGNC
Official Full Name
RNA, U6 small nuclear 551, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:47514
See related
Ensembl:ENSG00000252470 AllianceGenome:HGNC:47514
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See RNU6-551P in Genome Data Viewer
Location:
4q25
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 4 NC_000004.12 (107435118..107435220)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 4 NC_060928.1 (110736270..110736372)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 4 NC_000004.11 (108356275..108356377)

Chromosome 4 - NC_000004.12Genomic Context describing neighboring genes Neighboring gene Rac family small GTPase 1 pseudogene 5 Neighboring gene uncharacterized LOC102725220 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr4:108190059-108190618 Neighboring gene NANOG hESC enhancer GRCh37_chr4:108211768-108212293 Neighboring gene Sharpr-MPRA regulatory region 1704 Neighboring gene H3K27ac hESC enhancer GRCh37_chr4:108300461-108301042 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr4:108340321-108341520 Neighboring gene uncharacterized LOC105377358 Neighboring gene 3'-phosphoadenosine 5'-phosphosulfate synthase 1 Neighboring gene ReSE screen-validated silencer GRCh37_chr4:108626049-108626213 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 21789 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 15612

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_044448.1 

    Range
    101..203
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000004.12 Reference GRCh38.p14 Primary Assembly

    Range
    107435118..107435220
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060928.1 Alternate T2T-CHM13v2.0

    Range
    110736270..110736372
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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