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POLHP1 DNA polymerase eta pseudogene 1 [ Homo sapiens (human) ]

Gene ID: 106480782, updated on 17-Sep-2024

Summary

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Official Symbol
POLHP1provided by HGNC
Official Full Name
DNA polymerase eta pseudogene 1provided by HGNC
Primary source
HGNC:HGNC:43967
See related
AllianceGenome:HGNC:43967
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See POLHP1 in Genome Data Viewer
Location:
2q35
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (216156334..216157011, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (216641746..216642423, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (217021057..217021734, complement)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene melanoregulin Neighboring gene ATAC-STARR-seq lymphoblastoid active region 17083 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 17084 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 17085 Neighboring gene peroxisomal trans-2-enoyl-CoA reductase Neighboring gene ATAC-STARR-seq lymphoblastoid active region 17086 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 17087 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 12303 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 17088 Neighboring gene transmembrane protein 169 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:216973795-216974416 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 17089 Neighboring gene Sharpr-MPRA regulatory regions 7837 and 8351 Neighboring gene X-ray repair cross complementing 5 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 17091 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 17092 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr2:217020960-217022159 Neighboring gene heterogeneous nuclear ribonucleoprotein A1 pseudogene Neighboring gene long intergenic non-protein coding RNA 1963

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

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Other Names

  • polymerase (DNA directed), eta pseudogene 1
  • polymerase (DNA) eta pseudogene 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_045122.2 

    Range
    1..678
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

    Range
    216156334..216157011 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060926.1 Alternate T2T-CHM13v2.0

    Range
    216641746..216642423 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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