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RNU7-172P RNA, U7 small nuclear 172 pseudogene [ Homo sapiens (human) ]

Gene ID: 106480828, updated on 17-Sep-2024

Summary

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Official Symbol
RNU7-172Pprovided by HGNC
Official Full Name
RNA, U7 small nuclear 172 pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:45706
See related
Ensembl:ENSG00000252934 AllianceGenome:HGNC:45706
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See RNU7-172P in Genome Data Viewer
Location:
2p16.2
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (54166944..54167007, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (54163152..54163215, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (54394081..54394144, complement)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene acylphosphatase 2 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr2:54300334-54301533 Neighboring gene high mobility group box 1 pseudogene 31 Neighboring gene Sharpr-MPRA regulatory region 4186 Neighboring gene Sharpr-MPRA regulatory region 9427 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:54321929-54322624 Neighboring gene uncharacterized LOC105374615 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 11485 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 11486 Neighboring gene Sharpr-MPRA regulatory region 3084 Neighboring gene uncharacterized LOC105374610 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 15758 Neighboring gene TSPY like 6 Neighboring gene ciliary microtubule inner protein 6

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See Variation Viewer (GRCh37.p13)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_044396.1 

    Range
    101..164
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

    Range
    54166944..54167007 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060926.1 Alternate T2T-CHM13v2.0

    Range
    54163152..54163215 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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