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RN7SKP142 RN7SK pseudogene 142 [ Homo sapiens (human) ]

Gene ID: 106480877, updated on 17-Sep-2024

Summary

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Official Symbol
RN7SKP142provided by HGNC
Official Full Name
RN7SK pseudogene 142provided by HGNC
Primary source
HGNC:HGNC:45866
See related
Ensembl:ENSG00000223168 AllianceGenome:HGNC:45866
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See RN7SKP142 in Genome Data Viewer
Location:
16q12.1
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 16 NC_000016.10 (51671236..51671563, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 16 NC_060940.1 (57469068..57469395, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 16 NC_000016.9 (51705147..51705474, complement)

Chromosome 16 - NC_000016.10Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107984892 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr16:51654939-51656138 Neighboring gene VISTA enhancer hs72 Neighboring gene VISTA enhancer hs71 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:51685231-51685835 Neighboring gene heterogeneous nuclear ribonucleoprotein A1 like 3 Neighboring gene ReSE screen-validated silencer GRCh37_chr16:51738563-51738778 Neighboring gene uncharacterized LOC105371257 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:51807178-51807678 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:51807679-51808179 Neighboring gene long intergenic non-protein coding RNA 1571 Neighboring gene NANOG hESC enhancer GRCh37_chr16:51888422-51888923 Neighboring gene uncharacterized LOC124903765

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

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Other Names

  • RNA, 7SK small nuclear pseudogene 142

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_044789.1 

    Range
    101..428
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000016.10 Reference GRCh38.p14 Primary Assembly

    Range
    51671236..51671563 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060940.1 Alternate T2T-CHM13v2.0

    Range
    57469068..57469395 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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