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GPAA1P2 glycosylphosphatidylinositol anchor attachment 1 pseudogene 2 [ Homo sapiens (human) ]

Gene ID: 106481722, updated on 17-Sep-2024

Summary

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Official Symbol
GPAA1P2provided by HGNC
Official Full Name
glycosylphosphatidylinositol anchor attachment 1 pseudogene 2provided by HGNC
Primary source
HGNC:HGNC:51484
See related
Ensembl:ENSG00000230596 AllianceGenome:HGNC:51484
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See GPAA1P2 in Genome Data Viewer
Location:
2q13
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (110386413..110387436, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (110808884..110809907, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (111143990..111145013, complement)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene zinc finger protein 532 pseudogene Neighboring gene LIM zinc finger domain containing 4 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:111129727-111130460 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:111130461-111131196 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:111131197-111131930 Neighboring gene long intergenic non-protein coding RNA 1106 Neighboring gene zinc finger and BTB domain containing 45 pseudogene 2 Neighboring gene glycosylphosphatidylinositol anchor attachment protein 1 homolog (yeast) pseudogene Neighboring gene uncharacterized LOC124906063

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

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Homology

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_043395.2 

    Range
    98..1121
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

    Range
    110386413..110387436 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060926.1 Alternate T2T-CHM13v2.0

    Range
    110808884..110809907 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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