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RNU6-1122P RNA, U6 small nuclear 1122, pseudogene [ Homo sapiens (human) ]

Gene ID: 106481936, updated on 17-Sep-2024

Summary

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Official Symbol
RNU6-1122Pprovided by HGNC
Official Full Name
RNA, U6 small nuclear 1122, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:48085
See related
Ensembl:ENSG00000207178 AllianceGenome:HGNC:48085
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See RNU6-1122P in Genome Data Viewer
Location:
2q32.1
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (182873841..182873947)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (183362797..183362903)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (183738569..183738675)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene DnaJ heat shock protein family (Hsp40) member C10 Neighboring gene MPRA-validated peak3967 silencer Neighboring gene ribosomal protein L31 pseudogene 15 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr2:183683314-183684194 Neighboring gene uncharacterized LOC124907916 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:183730528-183731496 Neighboring gene frizzled related protein Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr2:183771671-183772172 Neighboring gene NCK associated protein 1 Neighboring gene H3K27ac hESC enhancer GRCh37_chr2:183814331-183814830 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 12162 Neighboring gene ReSE screen-validated silencer GRCh37_chr2:183903107-183903758 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:183913521-183914486 Neighboring gene NANOG hESC enhancer GRCh37_chr2:183915026-183915527 Neighboring gene small nucleolar RNA SNORA77

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_045012.1 

    Range
    101..207
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

    Range
    182873841..182873947
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060926.1 Alternate T2T-CHM13v2.0

    Range
    183362797..183362903
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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