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RNU6-1244P RNA, U6 small nuclear 1244, pseudogene [ Homo sapiens (human) ]

Gene ID: 106481945, updated on 17-Sep-2024

Summary

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Official Symbol
RNU6-1244Pprovided by HGNC
Official Full Name
RNA, U6 small nuclear 1244, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:48207
See related
Ensembl:ENSG00000200484 AllianceGenome:HGNC:48207
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See RNU6-1244P in Genome Data Viewer
Location:
10p11.22
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 10 NC_000010.11 (32394558..32394665, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 10 NC_060934.1 (32423644..32423751, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 10 NC_000010.10 (32683486..32683593, complement)

Chromosome 10 - NC_000010.11Genomic Context describing neighboring genes Neighboring gene ReSE screen-validated silencer GRCh37_chr10:32536341-32536558 Neighboring gene H3K27ac hESC enhancer GRCh37_chr10:32542436-32542936 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 2284 Neighboring gene ribosomal protein S24 pseudogene 13 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3245 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 2285 Neighboring gene enhancer of polycomb homolog 1 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 2286 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3246 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3247 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 2287 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 2288 Neighboring gene H3K27ac hESC enhancer GRCh37_chr10:32667292-32667792 Neighboring gene H3K27ac hESC enhancer GRCh37_chr10:32667793-32668293 Neighboring gene ReSE screen-validated silencer GRCh37_chr10:32668668-32668769 Neighboring gene EPC1 antisense RNA 1 Neighboring gene uncharacterized LOC101929431 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3248 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 2289 Neighboring gene ReSE screen-validated silencer GRCh37_chr10:32790971-32791162 Neighboring gene coiled-coil domain containing 7 Neighboring gene C1D nuclear receptor corepressor pseudogene 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_043118.1 

    Range
    101..208
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000010.11 Reference GRCh38.p14 Primary Assembly

    Range
    32394558..32394665 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060934.1 Alternate T2T-CHM13v2.0

    Range
    32423644..32423751 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Other Literature Sources
Molecular Biology Databases