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tmem67 transmembrane protein 67 [ Austrofundulus limnaeus ]

Gene ID: 106515105, updated on 13-Mar-2024

Summary

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Gene symbol
tmem67
Gene description
transmembrane protein 67
Gene type
protein coding
RefSeq status
MODEL
Organism
Austrofundulus limnaeus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Rivulidae; Austrofundulus
Annotation information
Annotation category: partial on reference assembly
Orthologs
human zebrafish all
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Genomic context

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See tmem67 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
25
Annotation release Status Assembly Chr Location
100 current Austrofundulus_limnaeus-1.0 (GCF_001266775.1) Unplaced Scaffold NW_013952428.1 (1484070..1503632, complement)

NW_013952428.1Genomic Context describing neighboring genes Neighboring gene myosin-10-like Neighboring gene uncharacterized LOC106515060 Neighboring gene uncharacterized LOC106515110 Neighboring gene RNA binding motif protein 12Ba

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_013952428.1 Unplaced Scaffold Reference Austrofundulus_limnaeus-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cilium assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of MKS complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in ciliary transition zone IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
meckelin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Austrofundulus limnaeus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Austrofundulus_limnaeus-1.0

Genomic

  1. NW_013952428.1 Reference Austrofundulus_limnaeus-1.0

    Range
    1484070..1503632 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014004736.1 → XP_013860190.1  meckelin isoform X1

    UniProtKB/TrEMBL
    A0A2I4AXH9
    Conserved Domains (1) summary
    pfam09773
    Location:163 → 988
    Meckelin; Meckelin (Transmembrane protein 67)

  2. XM_014004737.1 → XP_013860191.1  meckelin isoform X2

    UniProtKB/TrEMBL
    A0A2I4AXI5
    Conserved Domains (1) summary
    pfam09773
    Location:163 → 985
    Meckelin; Meckelin (Transmembrane protein 67)
Nucleotide Protein
Heading Accession and Version

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