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LOC106869775 S-crystallin 1 [ Octopus bimaculoides (California two-spot octopus) ]

Gene ID: 106869775, updated on 23-Nov-2023

Summary

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Gene symbol
LOC106869775
Gene description
S-crystallin 1
Locus tag
OCBIM_22011307mg
See related
EnsemblRapid:LOC106869775
Gene type
protein coding
RefSeq status
MODEL
Organism
Octopus bimaculoides
Lineage
Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Cephalopoda; Coleoidea; Octopodiformes; Octopoda; Incirrata; Octopodidae; Octopus
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Genomic context

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Location:
chromosome: 5
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2023_01 current ASM119413v2 (GCF_001194135.2) 5 NC_068985.1 (108745776..108755770)
100 previous assembly Octopus_bimaculoides_v2_0 (GCF_001194135.1) Unplaced Scaffold NW_014661097.1 (2100..12004)

Chromosome 5 - NC_068985.1Genomic Context describing neighboring genes Neighboring gene S-crystallin 3-like Neighboring gene S-crystallin 1-like Neighboring gene S-crystallin 3 Neighboring gene S-crystallin 1-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Analysis of the 3' untranslated regions of alpha-tubulin and S-crystallin mRNA and the identification of CPEB in dark- and light-adapted octopus retinas. Kelly S, et al. Mol Vis, 2008 Aug 4. PMID 18682811, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glutathione transferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glutathione metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: S-crystallin 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_001194135.2-RS_

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM119413v2 Primary Assembly

Genomic

  1. NC_068985.1 Reference ASM119413v2 Primary Assembly

    Range
    108745776..108755770
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014915635.2 → XP_014771121.2  LOW QUALITY PROTEIN: S-crystallin 1

    Related
    XP_014771121.2, XM_014915635.2
Nucleotide Protein
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