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MTND2P40 MT-ND2 pseudogene 40 [ Homo sapiens (human) ]

Gene ID: 107075280, updated on 17-Sep-2024

Summary

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Official Symbol
MTND2P40provided by HGNC
Official Full Name
MT-ND2 pseudogene 40provided by HGNC
Primary source
HGNC:HGNC:52084
See related
Ensembl:ENSG00000236483 AllianceGenome:HGNC:52084
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See MTND2P40 in Genome Data Viewer
Location:
19p13.2
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 19 NC_000019.10 (12502675..12504106)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 19 NC_060943.1 (12631081..12632512)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 19 NC_000019.9 (12613489..12614920)

Chromosome 19 - NC_000019.10Genomic Context describing neighboring genes Neighboring gene zinc finger protein 443 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 10150 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 14055 Neighboring gene zinc finger protein 709 Neighboring gene H3K27ac hESC enhancer GRCh37_chr19:12605336-12606216 Neighboring gene H3K27ac hESC enhancer GRCh37_chr19:12606217-12607096 Neighboring gene MT-CO1 pseudogene 27 Neighboring gene MT-CO2 pseudogene 27

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

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Other Names

  • mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 pseudogene 40

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_046514.1 

    Range
    101..1532
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000019.10 Reference GRCh38.p14 Primary Assembly

    Range
    12502675..12504106
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060943.1 Alternate T2T-CHM13v2.0

    Range
    12631081..12632512
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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