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ELOCP27 elongin C pseudogene 27 [ Homo sapiens (human) ]

Gene ID: 107133523, updated on 10-Oct-2023

Summary

Official Symbol
ELOCP27provided by HGNC
Official Full Name
elongin C pseudogene 27provided by HGNC
Primary source
HGNC:HGNC:31692
See related
AllianceGenome:HGNC:31692
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
TCEB1P27
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Genomic context

See ELOCP27 in Genome Data Viewer
Location:
18p11.31
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 18 NC_000018.10 (4459101..4471452)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 18 NC_060942.1 (4619372..4631725)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 18 NC_000018.9 (4459101..4471452)

Chromosome 18 - NC_000018.10Genomic Context describing neighboring genes Neighboring gene DLG associated protein 1 Neighboring gene uncharacterized LOC124904239 Neighboring gene Sharpr-MPRA regulatory region 11006 Neighboring gene NANOG hESC enhancer GRCh37_chr18:4195745-4196246 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_47861 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_47879 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr18:4233399-4234316 Neighboring gene DLGAP1 antisense RNA 5 Neighboring gene Sharpr-MPRA regulatory region 437 Neighboring gene ReSE screen-validated silencer GRCh37_chr18:4407683-4407856 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 9259 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr18:4477591-4478233 Neighboring gene uncharacterized LOC105371968 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr18:4494750-4495406 Neighboring gene ReSE screen-validated silencer GRCh37_chr18:4603865-4604091 Neighboring gene ReSE screen-validated silencer GRCh37_chr18:4753197-4753409 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr18:4854578-4855210 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr18:4917478-4918174 Neighboring gene ReSE screen-validated silencer GRCh37_chr18:4944402-4944590 Neighboring gene OCT4-NANOG-H3K4me1 hESC enhancer GRCh37_chr18:4987693-4988334 Neighboring gene OCT4-NANOG-H3K4me1 hESC enhancer GRCh37_chr18:4988335-4988974 Neighboring gene peptidylprolyl isomerase A pseudogene 14

Genomic regions, transcripts, and products

General gene information

Other Names

  • transcription elongation factor B (SIII), polypeptide 1 (15kDa, elongin C) pseudogene 27
  • transcription elongation factor B subunit 1 pseudogene 27

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_046681.3 

    Range
    101..12452
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    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000018.10 Reference GRCh38.p14 Primary Assembly

    Range
    4459101..4471452
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060942.1 Alternate T2T-CHM13v2.0

    Range
    4619372..4631725
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)