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Asxl3 ASXL transcriptional regulator 3 [ Marmota marmota marmota (Alpine marmot) ]

Gene ID: 107139402, updated on 10-Oct-2024

Summary

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Gene symbol
Asxl3
Gene description
ASXL transcriptional regulator 3
See related
Ensembl:ENSMMMG00000008114
Gene type
protein coding
RefSeq status
MODEL
Organism
Marmota marmota marmota (sub-species: marmota)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Marmota
Orthologs
human mouse all
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Genomic context

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See Asxl3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
101 current marMar (GCF_001458135.2) Unplaced Scaffold NW_025999990.1 (31825085..31965459, complement)
100 previous assembly marMar2.1 (GCF_001458135.1) Unplaced Scaffold NW_015351220.1 (31826555..31929436, complement)

NW_025999990.1Genomic Context describing neighboring genes Neighboring gene dystrobrevin alpha Neighboring gene uncharacterized LOC125617741 Neighboring gene nucleolar protein 4 Neighboring gene U6 spliceosomal RNA Neighboring gene lamin-B1-like Neighboring gene coiled-coil domain containing 178

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables chromatin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables peroxisome proliferator activated receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in animal organ morphogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of PR-DUB complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: putative Polycomb group protein ASXL3
Names
additional sex combs like 3, transcriptional regulator

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Marmota marmota marmota Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference marMar

Genomic

  1. NW_025999990.1 Reference marMar

    Range
    31825085..31965459 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015482250.2 → XP_015337736.2  LOW QUALITY PROTEIN: putative Polycomb group protein ASXL3

    UniProtKB/TrEMBL
    A0AAJ7AEY6
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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