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Dtna dystrobrevin alpha [ Marmota marmota marmota (Alpine marmot) ]

Gene ID: 107139550, updated on 1-Aug-2024

Summary

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Gene symbol
Dtna
Gene description
dystrobrevin alpha
See related
Ensembl:ENSMMMG00000007833
Gene type
protein coding
RefSeq status
MODEL
Organism
Marmota marmota marmota (sub-species: marmota)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Marmota
Orthologs
human mouse all
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Genomic context

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See Dtna in Genome Data Viewer
Location:
chromosome: Un
Exon count:
31
Annotation release Status Assembly Chr Location
101 current marMar (GCF_001458135.2) Unplaced Scaffold NW_025999990.1 (30884065..31199745, complement)
100 previous assembly marMar2.1 (GCF_001458135.1) Unplaced Scaffold NW_015351220.1 (30884982..31137530, complement)

NW_025999990.1Genomic Context describing neighboring genes Neighboring gene microtubule associated protein RP/EB family member 2 Neighboring gene transfer RNA alanine (anticodon AGC) Neighboring gene uncharacterized LOC125617741 Neighboring gene nucleolar protein 4 Neighboring gene ASXL transcriptional regulator 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in synaptic signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in synapse IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dystrobrevin alpha

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Marmota marmota marmota Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference marMar

Genomic

  1. NW_025999990.1 Reference marMar

    Range
    30884065..31199745 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048806343.1 → XP_048662300.1  dystrobrevin alpha isoform X1

    UniProtKB/TrEMBL
    A0AAJ8DA74

  2. XM_048806342.1 → XP_048662299.1  dystrobrevin alpha isoform X1

    UniProtKB/TrEMBL
    A0AAJ8DA74

  3. XM_048806340.1 → XP_048662297.1  dystrobrevin alpha isoform X1

    UniProtKB/TrEMBL
    A0AAJ8DA74

  4. XM_048806347.1 → XP_048662304.1  dystrobrevin alpha isoform X3

    UniProtKB/TrEMBL
    A0AAJ8ABJ5

  5. XM_048806346.1 → XP_048662303.1  dystrobrevin alpha isoform X2

    UniProtKB/TrEMBL
    A0AAJ8DAA2

  6. XM_048806348.1 → XP_048662305.1  dystrobrevin alpha isoform X4

    UniProtKB/TrEMBL
    A0AAJ8ABF6

  7. XM_048806351.1 → XP_048662308.1  dystrobrevin alpha isoform X6

    UniProtKB/TrEMBL
    A0AAJ8ABF9

  8. XM_048806349.1 → XP_048662306.1  dystrobrevin alpha isoform X5

    UniProtKB/TrEMBL
    A0AAJ8ACV7

  9. XM_048806353.1 → XP_048662310.1  dystrobrevin alpha isoform X7

    UniProtKB/TrEMBL
    A0AAJ8ABW0

  10. XM_048806356.1 → XP_048662313.1  dystrobrevin alpha isoform X10

    UniProtKB/TrEMBL
    A0AAJ8AC37

  11. XM_048806354.1 → XP_048662311.1  dystrobrevin alpha isoform X8

    UniProtKB/TrEMBL
    A0AAJ8ACZ7

  12. XM_048806355.1 → XP_048662312.1  dystrobrevin alpha isoform X9

    UniProtKB/TrEMBL
    A0AAJ8ACZ9

  13. XM_048806359.1 → XP_048662316.1  dystrobrevin alpha isoform X14

    UniProtKB/TrEMBL
    A0AAJ8D9Z3

  14. XM_015482445.2 → XP_015337931.1  dystrobrevin alpha isoform X25

    UniProtKB/TrEMBL
    A0AAJ7AFM2
    Conserved Domains (4) summary
    cd02334
    Location:241 → 289
    ZZ_dystrophin; Zinc finger, ZZ type. Zinc finger present in dystrophin and dystrobrevin. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Dystrophin attaches actin filaments to an integral membrane ...
    pfam09068
    Location:16 → 140
    EF-hand_2; EF hand
    pfam09069
    Location:144 → 232
    EF-hand_3; EF-hand
    pfam13874
    Location:467 → 550
    Nup54; Nucleoporin complex subunit 54

  15. XM_048806357.1 → XP_048662314.1  dystrobrevin alpha isoform X11

    UniProtKB/TrEMBL
    A0AAJ8D9Y1

  16. XM_015482449.2 → XP_015337935.1  dystrobrevin alpha isoform X12

    UniProtKB/TrEMBL
    A0AAJ7AF86
    Conserved Domains (4) summary
    cd02334
    Location:241 → 289
    ZZ_dystrophin; Zinc finger, ZZ type. Zinc finger present in dystrophin and dystrobrevin. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Dystrophin attaches actin filaments to an integral membrane ...
    pfam09068
    Location:16 → 140
    EF-hand_2; EF hand
    pfam09069
    Location:144 → 232
    EF-hand_3; EF-hand
    pfam13874
    Location:410 → 493
    Nup54; Nucleoporin complex subunit 54

  17. XM_048806358.1 → XP_048662315.1  dystrobrevin alpha isoform X13

    UniProtKB/TrEMBL
    A0AAJ8DA79

  18. XM_048806360.1 → XP_048662317.1  dystrobrevin alpha isoform X15

    UniProtKB/TrEMBL
    A0AAJ8DA98

  19. XM_015482447.2 → XP_015337933.1  dystrobrevin alpha isoform X16

    UniProtKB/TrEMBL
    A0A8C5Z4Z6
    Related
    ENSMMMP00000008913.1
    Conserved Domains (4) summary
    COG0419
    Location:365 → 494
    SbcC; DNA repair exonuclease SbcCD ATPase subunit [Replication, recombination and repair]
    cd02334
    Location:241 → 289
    ZZ_dystrophin; Zinc finger, ZZ type. Zinc finger present in dystrophin and dystrobrevin. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Dystrophin attaches actin filaments to an integral membrane ...
    cd16249
    Location:54 → 214
    EFh_DTNA; EF-hand-like motif found in alpha-dystrobrevin
    cl39057
    Location:408 → 598
    MS_channel; Mechanosensitive ion channel

  20. XM_048806345.1 → XP_048662302.1  dystrobrevin alpha isoform X1

    UniProtKB/TrEMBL
    A0AAJ8DA74

  21. XM_048806344.1 → XP_048662301.1  dystrobrevin alpha isoform X1

    UniProtKB/TrEMBL
    A0AAJ8DA74

  22. XM_048806350.1 → XP_048662307.1  dystrobrevin alpha isoform X5

    UniProtKB/TrEMBL
    A0AAJ8ACV7

  23. XM_048806361.1 → XP_048662318.1  dystrobrevin alpha isoform X16

    UniProtKB/TrEMBL
    A0A8C5Z4Z6

  24. XM_048806352.1 → XP_048662309.1  dystrobrevin alpha isoform X6

    UniProtKB/TrEMBL
    A0AAJ8ABF9

  25. XM_048806362.1 → XP_048662319.1  dystrobrevin alpha isoform X17

    UniProtKB/TrEMBL
    A0AAJ8ABK5

  26. XM_048806363.1 → XP_048662320.1  dystrobrevin alpha isoform X18

    UniProtKB/TrEMBL
    A0AAJ8ABG5

  27. XM_048806364.1 → XP_048662321.1  dystrobrevin alpha isoform X19

    UniProtKB/TrEMBL
    A0AAJ8ABH0

  28. XM_048806367.1 → XP_048662324.1  dystrobrevin alpha isoform X20

    UniProtKB/TrEMBL
    A0AAJ8AC80

  29. XM_048806368.1 → XP_048662325.1  dystrobrevin alpha isoform X21

    UniProtKB/TrEMBL
    A0AAJ8ABX0

  30. XM_048806370.1 → XP_048662327.1  dystrobrevin alpha isoform X22

    UniProtKB/TrEMBL
    A0AAJ8AC47

  31. XM_048806366.1 → XP_048662323.1  dystrobrevin alpha isoform X19

    UniProtKB/TrEMBL
    A0AAJ8ABH0

  32. XM_048806371.1 → XP_048662328.1  dystrobrevin alpha isoform X22

    UniProtKB/TrEMBL
    A0AAJ8AC47

  33. XM_048806369.1 → XP_048662326.1  dystrobrevin alpha isoform X21

    UniProtKB/TrEMBL
    A0AAJ8ABX0

  34. XM_048806372.1 → XP_048662329.1  dystrobrevin alpha isoform X23

    UniProtKB/TrEMBL
    A0AAJ8D9Y5

  35. XM_015482448.2 → XP_015337934.1  dystrobrevin alpha isoform X24

    UniProtKB/TrEMBL
    A0A8C5Z3E9
    Related
    ENSMMMP00000008927.1
    Conserved Domains (2) summary
    cd02334
    Location:241 → 289
    ZZ_dystrophin; Zinc finger, ZZ type. Zinc finger present in dystrophin and dystrobrevin. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Dystrophin attaches actin filaments to an integral membrane ...
    cd16249
    Location:54 → 214
    EFh_DTNA; EF-hand-like motif found in alpha-dystrobrevin

  36. XM_048806373.1 → XP_048662330.1  dystrobrevin alpha isoform X23

    UniProtKB/TrEMBL
    A0AAJ8D9Y5

  37. XM_048806374.1 → XP_048662331.1  dystrobrevin alpha isoform X24

    UniProtKB/TrEMBL
    A0A8C5Z3E9
Nucleotide Protein
Heading Accession and Version

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